circRNA basic information
circBase ID: hsa_circ_0097009
Name: -
Synonym: circ_0097009
Host Gene: -
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; normal tissues; xenograft tumor tissues

Cell lines:

THLE-2; Huh7; SNU-387

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: RNF38
Associated microRNA: miR-568
Biological function: Circ_0097009 acts as an oncogenic circRNA in HCC; its knockdown suppresses colony formation, proliferation, migration, invasion, angiogenesis and tumor growth, and promotes apoptosis.
Molecular mechanism: Circ_0097009 sponges miR-568 to up-regulate RNF38 expression, forming the circ_0097009/miR-568/RNF38 axis in HCC cells.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); angiogenesis (promotes); apoptosis (inhibits); metastasis (promotes); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RNase R Treatment; RT-qPCR; Clinical Sample Validation; Transfection; Colony Formation Assay; EdU Staining; Wound Healing Assay; Transwell Assay; Annexin V/PI Flow Cytometry; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

circ_0097009/miR-568/RNF38 axis was expected to be a novel therapeutic option for HCC patients

Description:

Hsa_circ_0097009/circ_0097009 is up-regulated in HCC tissues and cells and functions as an oncogenic circRNA. Its knockdown suppresses HCC cell proliferation, colony formation, migration, invasion, angiogenesis and xenograft tumor growth while promoting apoptosis. Mechanistically, circ_0097009 sponges miR-568 to up-regulate RNF38, forming a circ_0097009/miR-568/RNF38 regulatory axis with potential therapeutic relevance.

Confidence score:

0.8006

Other information
Title:

Hsa_circ_0097009 regulates proliferation, apoptosis, migration and invasion of hepatocellular carcinoma cells via miR-568/RNF38 axis.

Journal: Bratislavske lekarske listy
Published: 2023
PubMed ID: 36598315
Study type:

combined biological and clinical study

Data availability: -
Code availability: -