circRNA basic information
circBase ID: -
Name: hsa_circ_RHOBTB3
Synonym: -
Host Gene: RHOBTB3
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissue; paired non-tumorous tissues / adjacent non-tumorous tissues / adjacent normal tissues

Cell lines:

AGS; HGC27; MKN45; GES-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: p21
Associated microRNA: miR-654-3p
Biological function: inhibits gastric cancer cell growth and proliferation; induces G1 phase arrest; inhibits xenograft tumor growth
Molecular mechanism: ceRNA/miRNA sponge: circRHOBTB3 sponges miR-654-3p and restores p21 protein expression
Biological pathway or process:

proliferation (inhibits); cell cycle (inhibits); ceRNA regulation (other)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Actinomycin D / DRB Stability Assay; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Survival Analysis; Transfection; Luciferase Reporter Assay; RNA Pull-Down; CCK8; EdU Staining; Colony Formation Assay; Cell Cycle Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Western Blot; Bioinformatics Analysis

Clinical significance:

Low expression of circRHOBTB3 was correlated with tumor stage and patients' unfavorable prognosis; potential diagnosis marker and therapeutic target for GC

Description:

circRHOBTB3 is down-regulated in gastric cancer and functions as a tumor suppressor. It sponges miR-654-3p to restore p21 protein expression, thereby inhibiting proliferation and inducing G1 arrest, and suppressing xenograft tumor growth.

Confidence score:

0.8837

Other information
Title:

Circular RNA circRHOBTB3 acts as a sponge for miR-654-3p inhibiting gastric cancer growth.

Journal: Journal of experimental & clinical cancer research : CR
Published: 2020
PubMed ID: 31928527
Study type:

combined biological and clinical study

Data availability: GSE77661
Code availability: -