circRNA basic information
circBase ID: hsa_circ_0000268
Name: hsa_circ_ZRANB1
Synonym: cZRANB1
Host Gene: ZRANB1
Genomic location(hg19): chr10:126631025-126631876:+
Genomic location(hg38): chr10:124942456-124943307:+
Subcellular localization: exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumor tissues; para-cancerous tissues; blood exosomes

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: HMGA1, MMP9
Associated microRNA: hsa-let-7a-5p, hsa-let-7c-5p, hsa-miR-26a-5p, hsa-miR-125b-5p, hsa-miR-195-5p, hsa-miR-497-5p
Biological function: may promote tumor invasion
Molecular mechanism: predicted ceRNA/miRNA sponge competing for shared miRNAs with HMGA1 to increase HMGA1 expression
Biological pathway or process:

invasion (promotes); ceRNA regulation (promotes)

Detected method:
S
Validation methods:

RNA-seq; Bioinformatics Analysis

Clinical significance:

may be potential diagnostic biomarkers for HCC

Description:

cZRANB1 (hsa_circ_0000268) is up-regulated in HCC tumor tissues and is also higher in HCC patient blood exosomes. The study predicts that it may act as a ceRNA/miRNA sponge (e.g., for let-7 family and miR-125b-5p/miR-195-5p/miR-497-5p) to increase HMGA1 expression and thereby promote tumor invasion.

Confidence score:

0.1768

Other information
Title:

Transcriptome sequencing of hepatocellular carcinoma uncovers multiple types of dysregulated ncRNAs.

Journal: Frontiers in oncology
Published: 2022
PubMed ID: 36132143
Study type:

combined biological and clinical study

Data availability: SRP039694; SRP050551; SRP062885; SRP068976; SRP069212; SRP109668; SRP109666; SRP068498
Code availability: -