circRNA basic information
circBase ID: hsa_circ_0072088
Name: hsa_circ_ZFR
Synonym: circZFR
Host Gene: ZFR
Genomic location(hg19): chr5:32379220-32388780:-
Genomic location(hg38): chr5:32379114-32388674:-
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma / LUAD
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

LUAD tissues; adjacent non-tumor tissues

Cell lines:

A549; HCC827; H1975; PC9

In vivo animal model:

patient-derived xenograft / cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HNRNPLL, MYO1B
Associated microRNA: -
Biological function: Enhances oxidative phosphorylation (OXPHOS) for adaptation to energy stress; promotes cell proliferation; enhances migration and invasion; promotes tumor growth in vivo; induces cell cycle progression and inhibits apoptosis.
Molecular mechanism: circZFR binds HNRNPLL and protects it from ubiquitination-mediated degradation, thereby modulating alternative splicing (e.g., promoting MYO1B exon 23 inclusion) and activating AKT-mTOR signaling to enhance OXPHOS.
Biological pathway or process:

oxidative phosphorylation (promotes); proliferation (promotes); cell cycle (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); PI3K/AKT/mTOR (promotes); ceRNA regulation (inhibits); ubiquitination (inhibits); other pathway/process (other)

Detected method:
Q
S
M
Validation methods:

Microarray; RNA-seq; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RNA Pull-Down; RIP (RNA Immunoprecipitation); Co-IP; Luciferase Reporter Assay; Transfection; EdU Staining; Annexin V/PI Flow Cytometry; Cell Cycle Assay; Transwell Assay; In Vivo Animal Model; IHC (Immunohistochemistry); Western Blot; Clinical Sample Validation; Cohort Study; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circZFR expression is associated with higher T stage and poor prognosis, and is an independent prognostic factor in LUAD.

Description:

In LUAD, circZFR (hsa_circ_0072088) is induced by glucose deprivation and is upregulated in tumors. It promotes OXPHOS and malignant phenotypes by binding and stabilizing HNRNPLL (blocking ubiquitination), thereby altering alternative splicing (including MYO1B exon 23 inclusion) and activating AKT-mTOR signaling; high circZFR correlates with advanced T stage and poor prognosis.

Confidence score:

0.8988

Other information
Title:

Energy stress-induced circZFR enhances oxidative phosphorylation in lung adenocarcinoma via regulating alternative splicing.

Journal: Journal of experimental & clinical cancer research : CR
Published: 2023
PubMed ID: 37461053
Study type:

combined biological and clinical study

Data availability: GSE193064; GSE101586; GSE1016840; GSE140343; ENCSR490DYI
Code availability: -