circRNA basic information
circBase ID: hsa_circ_0004552
Name: hsa_circ_CARM1
Synonym: circCARM1 / circ_0004552
Host Gene: CARM1
Genomic location(hg19): chr19:11015626-11019883:+
Genomic location(hg38): chr19:10904950-10909207:+
Subcellular localization: cytoplasm; exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer / BC
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

breast cancer tissues; adjacent normal tissues; fresh breast cancer tissues; mice serum; mice tissues

Cell lines:

MDA-MB-231 / MDA-231; MDA-MB-468 / MDA-468; BT549; SKBR3; BT474; T47D; MCF7; MCF10A; 293T; HEK-293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: PFKFB2, EIF4A3, CARM1 pre-mRNA
Associated microRNA: miR-1252-5p
Biological function: Promotes breast cancer cell glycolysis, proliferation/survival, tumor growth, and suppresses mitochondrial respiration/OCR; exosomal circCARM1 from breast cancer spheroids reprograms cancer cell metabolism.
Molecular mechanism: EIF4A3 promotes circCARM1 biogenesis; exosomal circCARM1 acts as a ceRNA sponge for miR-1252-5p, thereby relieving miR-1252-5p-mediated repression of PFKFB2 and enhancing glycolysis.
Biological pathway or process:

glycolysis (promotes); proliferation (promotes); cell cycle (promotes); oxidative phosphorylation (inhibits); mitochondrial function (inhibits); ceRNA regulation (other); other pathway/process (promotes)

Detected method:
Q
H
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Microarray; Actinomycin D / DRB Stability Assay; RT-qPCR; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Cell Cycle Assay; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Western Blot; Bioinformatics Analysis

Clinical significance:

circCARM1 expression was higher in breast cancer tissues than adjacent normal tissues, suggesting oncogenic relevance in breast cancer; no explicit diagnostic or prognostic performance was reported.

Description:

This study identifies exosomal circCARM1 as an up-regulated circRNA in breast cancer spheroid/BCSC-derived exosomes and in breast cancer tissues. circCARM1 promotes breast cancer glycolysis, proliferation/survival, and tumor growth through a ceRNA mechanism involving miR-1252-5p and PFKFB2, while EIF4A3 supports circCARM1 biogenesis.

Confidence score:

0.8816

Other information
Title:

Exosomal circCARM1 from spheroids reprograms cell metabolism by regulating PFKFB2 in breast cancer.

Journal: Oncogene
Published: 2022
PubMed ID: 35027669
Study type:

combined biological and clinical study

Data availability: Supplementary material (Additional file 1 Table S1); Supplementary material available at https://doi.org/10.1038/s41388-021-02061-4; TCGA database
Code availability: -