circRNA basic information
circBase ID: hsa_circ_0005615
Name: hsa_circ_NFATC3
Synonym: circNFATC3
Host Gene: NFATC3
Genomic location(hg19): chr16:68155889-68157024:+
Genomic location(hg38): chr16:68121986-68123121:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0004958
MONDO name: oral cavity squamous cell carcinoma
Disease details: oral squamous cell carcinoma / OSCC
Disease DO ID:
0050866
Disease MeSH ID:
-
Disease NCIt ID:
C4833
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

OSCC tumor tissues; paracancerous tissues

Cell lines:

SCC25; HSC3; SCC15; HOK

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: LDHA, Ago2
Associated microRNA: miR-520h
Biological function: Promotes glycolysis metabolism, proliferation, migration, and invasion, and inhibits apoptosis in OSCC; promotes tumor growth in vivo.
Molecular mechanism: Acts as a ceRNA/miRNA sponge for miR-520h to modulate LDHA expression.
Biological pathway or process:

glycolysis (promotes); proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; divergent primers PCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; MTT; EdU Staining; Annexin V/PI Flow Cytometry; Transwell Assay; Wound Healing Assay; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); Clinical Sample Validation; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High level of circNFATC3 was correlated with lower overall survival.

Description:

circNFATC3 is up-regulated in OSCC tissues/cells and functions as an oncogenic circRNA. It promotes glycolysis, proliferation, migration and invasion and inhibits apoptosis by sponging miR-520h to de-repress LDHA; circNFATC3 knockdown suppresses xenograft tumor growth in vivo.

Confidence score:

0.8593

Other information
Title:

circNFATC3 facilitated the progression of oral squamous cell carcinoma via the miR-520h/LDHA axis.

Journal: Open medicine (Warsaw, Poland)
Published: 2023
PubMed ID: 37398901
Study type:

combined biological and clinical study

Data availability: The analyzed data sets generated during the present study are available from the corresponding author on reasonable request.
Code availability: -