circRNA basic information
circBase ID: hsa_circ_0050900
Name: hsa_circ_ACTN4
Synonym: circACTN4
Host Gene: ACTN4
Genomic location(hg19): chr19:39191239-39200116:+
Genomic location(hg38): chr19:38700599-38709476:+
Subcellular localization: nucleus
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

breast cancer tissues; para-cancer tissues; adjacent non-tumor tissues; tumor tissues

Cell lines:

MCF-7; SK-BR-3; ZR-75-1; BT-474; T-47D; MCF-10A; 293 T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: FUBP1, FIR, MYC, USF2
Associated microRNA: -
Biological function: promotes proliferation, migration, invasion, metastasis and tumorigenesis; inhibits apoptosis; promotes angiogenesis
Molecular mechanism: circACTN4 binds FUBP1 and competitively blocks FIR-FUBP1 interaction, activating MYC transcription; USF2 promotes circACTN4 biogenesis
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); apoptosis (inhibits); angiogenesis (promotes); cell cycle (promotes); other pathway/process (promotes)

Detected method:
Q
H
M
Validation methods:

Microarray; RNase R Treatment; Sanger Sequencing; Back-Splice Junction PCR / divergent primers PCR; RT-qPCR; ISH (In Situ Hybridization); FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Actinomycin D / DRB Stability Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Wound Healing Assay; Transwell Assay; Cell Cycle Assay; Annexin V/PI Flow Cytometry; Western Blot; RIP (RNA Immunoprecipitation); RNA Pull-Down; Co-IP; ChIP / ChIP-seq; Luciferase Reporter Assay; IF (Immunofluorescence); IHC (Immunohistochemistry); H&E Staining; In Vivo Animal Model; Clinical Sample Validation; Cohort Study; Survival Analysis; ROC Analysis; Bioinformatics Analysis

Clinical significance:

circACTN4 expression was correlated with clinical stage and poor prognosis; ROC AUC 0.719 for BC screening; circACTN4 overexpression was an independent predictor of poor prognosis in BC patients (HR = 4.566)

Description:

circACTN4 (hsa_circ_0050900), derived from ACTN4, is up-regulated in breast cancer tissues/cells and associates with advanced stage and poor prognosis. It localizes mainly in the nucleus and promotes proliferation, invasion and metastasis by binding FUBP1, blocking FIR-FUBP1 interaction, and activating MYC transcription; USF2 enhances circACTN4 biogenesis.

Confidence score:

0.9058

Other information
Title:

The circACTN4 interacts with FUBP1 to promote tumorigenesis and progression of breast cancer by regulating the expression of proto-oncogene MYC.

Journal: Molecular cancer
Published: 2021
PubMed ID: 34116677
Study type:

combined biological and clinical study

Data availability: available from the corresponding author on reasonable request
Code availability: -