circRNA basic information
circBase ID: -
Name: ssc_circ_AFF3
Synonym: circAFF3(L4,5,6).1
Host Gene: AFF3
 
 
 
 
 
 
Disease basic information
MONDO ID: MONDO:0025494
Mondo Name: porcine reproductive and respiratory syndrome
Disease details:
 Porcine Reproductive and Respiratory Syndrome
Disease DO ID: -
Disease MeSH ID: D019318
Disease NCIt ID: -
Disease ICD11 ID: -
Disease OMIM ID: -
Species: Sus scrofa
Sample Source: animal tissue
circRNA-disease information
Expression pattern:
DS
Cell type: macrophage
Cell type details: PAMs
Detected method:
primary cell isolation + RNA-seq
Description:

circAFF3(L4,5,6).1 was identified in RNA-seq analysis of PAMs isolated from PRRSV-infected pig lungs, within a differentially expressed circRNA landscape. It was predicted to regulate THBS2, DDX60, and FGFR1 via interaction with ssc-miR-149.
Other information
Title:

Host combats porcine reproductive and respiratory syndrome virus infection at non-coding RNAs level.

Journal: Virulence
Published: 2024
PubMed ID: 39403796
Data availability: -